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Compounds

Showing 1 - 50 of 15972 compounds
Compound ID Compound Pathways

PW_C040939

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(2Z)-2-aminobut-2-enoate

Conjugate base of 2-aminobut-2-enoic acid.

PW_C044587

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2-(2-methylpyridin-3-yl)ethanol

PW_C042939

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2-C-Methyl-D-erythritol-2,4-cyclodiphosphate

PW_C042943

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2-methoxy-6-all trans-octaprenyl-2-methoxy-1,4-benzoquinol

PW_C044560

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3-hydroxy-L-kynurenine

PW_C044588

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4-methyl-5-(2-phosphonooxyethyl)thiazole

PW_C044578

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4α-carboxy-5α-cholesta-8,24-dien-3β-ol

PW_C044574

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4α-formyl-4β-methyl-5α-cholesta-8,24-dien-3β-ol

PW_C044575

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4β-methyl-4α-carboxy-cholesta-8,24-dien-3β-ol

PW_C044591

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5-(hydroxymethyl)-2-methyl-4(1H)-pyrimidinone

PW_C044557

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6-hydroxymethyl-7,8-dihydropterin diphosphate

PW_C042525

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[PTS enzyme I]-Nπ-phospho-L-histidine

PW_C041107

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Citronellyl-CoA

PW_C041006

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D-altronate

C(O)C(O)C(O)C(O)C(O)C(=O)[O-] D-altronate is a member of the chemical class known as Sugar Acids and Derivatives. These are compounds containing a saccharide unit which bears a carboxylic acid group.

PW_C042923

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D-phenylalanine

PW_C044584

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di-trans, poly-cis-polyprenyl diphosphate (C80)

PW_C042942

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dTDP-thomosamine

PW_C044583

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ergosta-5,7,22,24(28)-tetraen-3-β-ol

PW_C042927

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ethanesulfonate

PW_C042920

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glycerophosphoserine

PW_C044564

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indoleglycerol phosphate

PW_C042928

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isethionate

PW_C040862

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L-ribulose 5-phosphate

OCC(=O)[C@@H](O)[C@@H](O)COP([O-])([O-])=O L-ribulose 5-phosphate is a member of the chemical class known as Pentoses. These are monosaccharides in which the carbohydrate moiety contains five carbon atoms. In Escherichia coli, RpiA catalyzes the interconversion of ribose-5-phosphate and ribulose-5-phosphate and is a key enzyme in the pentose phosphate pathway. (PMID 12182339) Interconversion of D-ribose-5-phosphate (R5P) and D-ribulose-5-phosphate is an important step in the pentose phosphate pathway. (PMID 18640127) A key player in LPS synthesis is the enzyme D-arabinose-5-phosphate isomerase (API), which catalyzes the reversible isomerization of D-ribulose-5-phosphate to D-arabinose-5-phosphate, a precursor of 3-deoxy-D-manno-octulosonate that is an essential residue of the LPS inner core. (PMID 20954237) Dihydroxybutanone phosphate synthase (DS) catalyzes a commitment step in riboflavin biosynthesis where ribulose 5-phosphate is converted to dihydroxybutanone phosphate and formate. (PMID 11053863) Ribose-5-phosphate isomerase A (RpiA) plays an important role in interconverting between ribose-5-phosphate (R5P) and ribulose-5-phosphate in the pentose phosphate pathway and the Calvin cycle. (PMID 19214439) (from ECMDB)

PW_C040997

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lipid A-core

CCCCCCCCCCCCCC(=O)OC(CC(OC2(C(C(OCC1(OC(OP([O-])([O-])=O)C(NC(=O)CC(O)CCCCCCCCCCC)C(OC(=O)CC(O)CCCCCCCCCCC)C(O)1))OC(C2OP([O-])([O-])=O)COC%12(C([O-])=O)(OC(C(O)CO)C(OC%10(OC(C(CO)O)C(C(OC9(OC(C(COC3(OC(C(CO)O)C(C(O)C3O)O))O)C(C(OC5(C(C(C(C(COC4(OC(CO)C(O)C(O)C(O)4))O5)O)OC6(C(C(C(C(CO)O6)O)O)OC8(C(O)C(C(C(COC7(OC(C(CO)O)C(C(O)C7O)O))O8)O)O)))O))C9O)OP([O-])(=O)[O-]))C%10O)OP([O-])(=O)[O-]))C(OC%11(C(=O)[O-])(OC(C(O)CO)C(O)C(O)C%11))C%12))NC(CC(CCCCCCCCCCC)OC(CCCCCCCCCCC)=O)=O))=O)CCCCCCCCCCC Lipid a-core belongs to the class of Polyhexoses. These are polysaccharides in which the saccharide units are hexoses. (inferred from compound structure) Lipopolysaccharide (LPS) is a major component on the surface of Gram negative bacteria and is composed of lipid A-core and the O antigen polysaccharide. (PMID 20333251) WaaL is a membrane enzyme implicated in ligating undecaprenyl-diphosphate (Und-PP)-linked O antigen to lipid A-core oligosaccharide. (PMID 19019161) MsbA is an essential ATP-binding cassette half-transporter in the cytoplasmic membrane of the gram-negative Escherichia coli and is required for the export of lipopolysaccharides (LPS) to the outer membrane, most likely by transporting the lipid A core moiety. (PMID 16159769)

PW_C044571

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Methylselenic acid

PW_C040925

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N-(5-phosphoribosyl)-anthranilate

C(OP(=O)([O-])[O-])C1(C(O)C(O)C(O1)NC2(C=CC=CC(C(=O)[O-])=2))

PW_C044603

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N-acetyl-α-D-glucosaminyl-diphosphodolichol

PW_C040855

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N-acetylglutamate semialdehyde

CC(=O)N[C@@H](CCC(O)=O)C(O)=O

PW_C042935

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N-carbamoyl-L-aspartate

PW_C040856

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N2-succinyl-L-arginine

NC(=[NH2+])NCCC[C@H](NC(=O)CCC([O-])=O)C([O-])=O

PW_C040857

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N2-succinylglutamate

[O-]C(=O)CC[C@H](NC(=O)CCC([O-])=O)C([O-])=O

PW_C040924

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N5-methyl--tetrahydropteroyl tri-L-glutamate

C([CH]2(NC1(C(NC(=NC=1NC2)N)=O)))NC3(=CC=C(C(NC(C(=O)[O-])CCC(NC(C(=O)[O-])CCC(NC(C(=O)[O-])CCC([O-])=O)=O)=O)=O)C=C3)

PW_C041011

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S-ribosyl-L-homocysteine

PW_C057930

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trans-zeatin

The trans-isomer of zeatin.

PW_C040980

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UDP

C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(=O)NC(=O)2))

PW_C040947

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β-D-glucose 6-phosphate

C(C1(OC(C(C(C1O)O)O)O))OP([O-])([O-])=O

PW_C040966

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β-L-fucopyranose

CC1(OC(C(C(C1O)O)O)O)

PW_C012708

Image HMDB31526: View Metabocard

()-2-Methylbutanal

()-2-Methylbutanal is a flavouring agent. ()-2-Methylbutanal belongs to the family of Aldehydes. These are organic compounds containing the aldehyde functional group.

PW_C041144

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(1R)-Glutathionyl-(2R)-hydroxy-1,2-dihydronaphthalene

PW_C041145

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(1R)-Hydroxy-(2R)-glutathionyl-1,2-dihydronaphthalene

PW_C044559

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(1R,2S)-homoisocitrate

PW_C040743

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(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

PW_C041146

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(1S)-Hydroxy-(2S)-glutathionyl-1,2-dihydronaphthalene

PW_C040927

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(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2(=C(C1(C=CC=CC=1N2))C(C(COP([O-])(=O)[O-])O)O)

PW_C041127

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(2,3-Dihydroxybenzoyl)adenylic acid

PW_C040773

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(2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl diphosphate

PW_C043278

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(2-Naphthyl)methanol

PW_C007230

Image HMDB11644: View Metabocard

(24R)-Cholest-5-ene-3-beta,7-alpha,24-triol

(24R)-Cholest-5-ene-3-beta,7-alpha,24-triol is a hydroxysterol and a bile acid intermediate. It is produced from the reaction of 24(R)-Hydroxycholesterol with the enzyme CYP39A, which is also known as 24-hydroxycholesterol 7alpha-hydroxylase (EC 1.14.13.99). This enzyme catalyzes the following reaction: (24R)-cholest-5-ene-3beta,24-diol + NADPH + H+ O2 = (24R)-cholest-5-ene-3beta,7alpha,24-triol + NADP+ + H2O. This leads to the 7-alpha hydroxylation of 24(R)-hydroxycholesterol. This enzyme can act on both the 24R and 24S isomers.

PW_C044550

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(2E)-cerotenoyl-CoA

PW_C002012

Image HMDB03948: View Metabocard

(2E)-Decenoyl-CoA

(2E)-Decenoyl-CoA is a beta-oxidation intermediate, the substrate of the enzyme peroxisomal acyl-CoA thioesterase 2 (PTE-2, 3.1.2.2), which is localized in the peroxisome. The peroxisomal beta-oxidation system contains two sets of enzymes, one of which is involved in the oxidation of branched chain fatty acids and intermediates in the hepatic bile acid biosynthetic pathway and consists of one or two branched-chain acyl-CoA oxidase(s), a D-specific bifunctional protein and the sterol carrier-like protein x (SCPx). Peroxisomes are cellular organelles present in all eukaryotic cells. They play an indispensable role in the metabolism of a variety of lipids including very long-chain fatty acids, dicarboxylic fatty acids, bile acids, prostaglandins, leukotrienes, thromboxanes, pristanic acid, and xenobiotic fatty acids. (PMID: 11673457).
Showing 1 - 50 of 15972 compounds