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Pathway Description
Camalexin Biosynthesis
Arabidopsis thaliana
Metabolic Pathway
Camalexin is a compound produced by Arabadopsis thaliana, used in plant defense. Its accumulation is induced by contact with parasites, and it inhibits the growth of those parasites.
Synthesis of camalexin starts with L-tryptophan, which reacts using tryptophan N-monooxygenases 1 and 2 to form N-hydroxy-L-tryptophan. This then reacts using the same enzyme to form N,N-dihydroxy-L-tryptophan, which spontaneously forms (E)-indol-3-ylacetaldoxime.
(E)-indol-3-ylacetaldoxime reversibly reacts with a indoleacetaldoxime dehydratase enzyme to form (Z)-indol-3-ylacetaldoxime, its isomer. The isomer then loses a water molecule via indoleacetaldoxime dehydratase again, forming 3-indoleacetonitrile. Another reaction with indoleacetaldoxime dehydratase forms 2-hydroxy-2-(1H-indol-3-yl0acetonitrile, which then reacts one final time with the indoleacetaldoxime dehydratase enzyme to lose a water molecule and form dehydro(indole-3-yl)acetonitrile.
At this point, a glutatione molecule is added using glutatione S-transferase F6 to form (glutation-S-yl)(1H-indol-3-yl)acetonitrile. A water molecule is added by gamma-glutamyl peptidases 1 and 3, as well as glutathione hydrolase 3, forming L-glutamic acid as a side product, as well as (L-cysteinylglycin-S-yl)(1H-indol-3-yl)acetonitrile. An unknown enzyme then catalyzes a reaction that adds a water molecule and removes a glycine, forming 2-(cystein-S-yl)-2-(1H-indol-3-yl)-acetonitrile. Then, in a reaction using bifunctional dihydrocamalexate synthase/camalexin synthase, an oxygen molecule is added, a hydrogen ion, hydrogen cyanide molecule and water molecule are removed, and (R)-dihydrocamalexate is formed. Finally, the same enzyme catalyzes the formation of camalexin, the final product of this pathway.
References
Camalexin Biosynthesis References
Bottcher C, Westphal L, Schmotz C, Prade E, Scheel D, Glawischnig E: The multifunctional enzyme CYP71B15 (PHYTOALEXIN DEFICIENT3) converts cysteine-indole-3-acetonitrile to camalexin in the indole-3-acetonitrile metabolic network of Arabidopsis thaliana. Plant Cell. 2009 Jun;21(6):1830-45. doi: 10.1105/tpc.109.066670. Epub 2009 Jun 30.
Pubmed: 19567706
Geu-Flores F, Moldrup ME, Bottcher C, Olsen CE, Scheel D, Halkier BA: Cytosolic gamma-glutamyl peptidases process glutathione conjugates in the biosynthesis of glucosinolates and camalexin in Arabidopsis. Plant Cell. 2011 Jun;23(6):2456-69. doi: 10.1105/tpc.111.083998. Epub 2011 Jun 28.
Pubmed: 21712415
Glawischnig E, Hansen BG, Olsen CE, Halkier BA: Camalexin is synthesized from indole-3-acetaldoxime, a key branching point between primary and secondary metabolism in Arabidopsis. Proc Natl Acad Sci U S A. 2004 May 25;101(21):8245-50. doi: 10.1073/pnas.0305876101. Epub 2004 May 17.
Pubmed: 15148388
Glawischnig E: The role of cytochrome P450 enzymes in the biosynthesis of camalexin. Biochem Soc Trans. 2006 Dec;34(Pt 6):1206-8. doi: 10.1042/BST0341206.
Pubmed: 17073786
Muller TM, Bottcher C, Morbitzer R, Gotz CC, Lehmann J, Lahaye T, Glawischnig E: TRANSCRIPTION ACTIVATOR-LIKE EFFECTOR NUCLEASE-Mediated Generation and Metabolic Analysis of Camalexin-Deficient cyp71a12 cyp71a13 Double Knockout Lines. Plant Physiol. 2015 Jul;168(3):849-58. doi: 10.1104/pp.15.00481. Epub 2015 May 7.
Pubmed: 25953104
Nafisi M, Goregaoker S, Botanga CJ, Glawischnig E, Olsen CE, Halkier BA, Glazebrook J: Arabidopsis cytochrome P450 monooxygenase 71A13 catalyzes the conversion of indole-3-acetaldoxime in camalexin synthesis. Plant Cell. 2007 Jun;19(6):2039-52. doi: 10.1105/tpc.107.051383. Epub 2007 Jun 15.
Pubmed: 17573535
Schuhegger R, Nafisi M, Mansourova M, Petersen BL, Olsen CE, Svatos A, Halkier BA, Glawischnig E: CYP71B15 (PAD3) catalyzes the final step in camalexin biosynthesis. Plant Physiol. 2006 Aug;141(4):1248-54. doi: 10.1104/pp.106.082024. Epub 2006 Jun 9.
Pubmed: 16766671
Su T, Xu J, Li Y, Lei L, Zhao L, Yang H, Feng J, Liu G, Ren D: Glutathione-indole-3-acetonitrile is required for camalexin biosynthesis in Arabidopsis thaliana. Plant Cell. 2011 Jan;23(1):364-80. doi: 10.1105/tpc.110.079145. Epub 2011 Jan 14.
Pubmed: 21239642
Zook M, Hammerschmidt R: Origin of the thiazole ring of camalexin, a phytoalexin from Arabidopsis thaliana. Plant Physiol. 1997 Feb;113(2):463-8.
Pubmed: 9046593
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