PathWhiz ID | Pathway | Meta Data |
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PW088745View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z))Rattus norvegicus
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In the visualization, all enzymes that are dark green in colour are membrane-localized. The first pathway synthesizes phosphatidylethanolamine from ethanolamine via the Kennedy pathway. First, the cytosol-localized enzyme choline/ethanolamine kinase catalyzes the conversion of choline into phosphocholine. Second, choline-phosphate cytidylyltransferase, localized to the endoplasmic reticulum membrane, catalyzes the conversion of phosphocholine to CDP-choline. Last, choline/ethanolaminephosphotransferase catalyzes phosphatidylcholine biosynthesis from CDP-choline. It requires either magnesium or manganese ions as cofactors. Phosphatidylethanolamine is also synthesized from phosphatidylserine at the mitochondrial inner membrane by phosphatidylserine decarboxylase. Phosphatidylserine, itself, is synthesized using a base-exchange reaction with phosphatidylcholine. This reaction is catalyzed by phosphatidylserine synthase which is located in the endoplasmic reticulum membrane.
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Creator: Carin Li Created On: August 10, 2018 at 20:54 Last Updated: August 10, 2018 at 20:54 |
PW016228View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z))Homo sapiens
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In Homo sapiens, there exist two phosphatidylethanolamine biosynthesis pathways. In the visualization, all enzymes that are dark green in colour are membrane-localized. The first pathway synthesizes phosphatidylethanolamine from ethanolamine via the Kennedy pathway. First, the cytosol-localized enzyme choline/ethanolamine kinase catalyzes the conversion of choline into phosphocholine. Second, choline-phosphate cytidylyltransferase, localized to the endoplasmic reticulum membrane, catalyzes the conversion of phosphocholine to CDP-choline. Last, choline/ethanolaminephosphotransferase catalyzes phosphatidylcholine biosynthesis from CDP-choline. It requires either magnesium or manganese ions as cofactors. Phosphatidylethanolamine is also synthesized from phosphatidylserine at the mitochondrial inner membrane by phosphatidylserine decarboxylase. Phosphatidylserine, itself, is synthesized using a base-exchange reaction with phosphatidylcholine. This reaction is catalyzed by phosphatidylserine synthase which is located in the endoplasmic reticulum membrane.
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Creator: Carin Li Created On: June 05, 2017 at 12:42 Last Updated: June 05, 2017 at 12:42 |
PW072547View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z))Mus musculus
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In the visualization, all enzymes that are dark green in colour are membrane-localized. The first pathway synthesizes phosphatidylethanolamine from ethanolamine via the Kennedy pathway. First, the cytosol-localized enzyme choline/ethanolamine kinase catalyzes the conversion of choline into phosphocholine. Second, choline-phosphate cytidylyltransferase, localized to the endoplasmic reticulum membrane, catalyzes the conversion of phosphocholine to CDP-choline. Last, choline/ethanolaminephosphotransferase catalyzes phosphatidylcholine biosynthesis from CDP-choline. It requires either magnesium or manganese ions as cofactors. Phosphatidylethanolamine is also synthesized from phosphatidylserine at the mitochondrial inner membrane by phosphatidylserine decarboxylase. Phosphatidylserine, itself, is synthesized using a base-exchange reaction with phosphatidylcholine. This reaction is catalyzed by phosphatidylserine synthase which is located in the endoplasmic reticulum membrane.
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Creator: Carin Li Created On: August 02, 2018 at 11:10 Last Updated: August 02, 2018 at 11:10 |
PW072794View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/20:0)Arabidopsis thaliana
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In Arabidopsis thaliana, there exist two phosphatidylethanolamine biosynthesis pathways. The first pathway consists of mainly enzymes localized to either the cytosol or the cell membrane. Cell membrane-localized enzymes in this pathway are not drawn as such for clarity. Instead, they are indicated with a dark green colour and appear to be free floating in the cytosol. This first pathway begins with serine decarboxylase catalyzing the biosynthesis of ethanolamine from serine. It requires pyridoxal 5'-phosphate as a cofactor. Next, choline/ethanolamine kinase, localized to the cell membrane, catalyzes the conversion of ethanolamine to phosphoethanolamine. Then ethanolamine-phosphate cytidylyltransferase, localized to the mitochondria outer membrane, catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine. Last, choline/ethanolaminephosphotransferase, localized to the cell membrane, catalyzes phosphatidylethanolamine CDP-ethanolamine, respectively. The second pathway consists of mainly enzymes localized to the endoplasmic reticulum membrane (also depicted in dark green in the image. Beginning in the cytosol, glycerol-3-phosphate dehydrogenase [NAD(+)] catalyzes the interconversion of glycerone phosphate (from glycolysis) and glycerol 3-phosphate. After glycerol 3-phosphate enters the endoplasmic reticulum, glycerol-3-phosphate acyltransferase esterifies the acyl-group from acyl-CoA to the sn-1 position of glycerol-3-phosphate. Third, 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 catalyzes the conversion of lysophosphatidic acid (LPA or 1-acyl-sn-glycerol 3-phosphate) into phosphatidic acid (PA or 1,2-diacyl-sn-glycerol 3-phosphate) by incorporating an acyl moiety at the 2nd position. Fourth, phosphatidate cytidylyltransferase catalyzes the conversion of a 1,2-diacyl-sn-glycerol 3-phosphate into a CDP-diacylglycerol. It requires a magnesium ion as a cofactor. Fifth, CDP-diacylglycerol--serine O-phosphatidyltransferase catalyzes the synthesis of phosphatidylserine from L-serine and a CDP-diacylglycerol. Last, phosphatidylserine decarboxylase catalyzes the formation of phosphatidylethanolamine from phosphatidylserine. It requires pyruvate as a cofactor.
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Creator: Carin Li Created On: August 02, 2018 at 13:40 Last Updated: August 02, 2018 at 13:40 |
PW088746View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/20:0)Rattus norvegicus
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In the visualization, all enzymes that are dark green in colour are membrane-localized. The first pathway synthesizes phosphatidylethanolamine from ethanolamine via the Kennedy pathway. First, the cytosol-localized enzyme choline/ethanolamine kinase catalyzes the conversion of choline into phosphocholine. Second, choline-phosphate cytidylyltransferase, localized to the endoplasmic reticulum membrane, catalyzes the conversion of phosphocholine to CDP-choline. Last, choline/ethanolaminephosphotransferase catalyzes phosphatidylcholine biosynthesis from CDP-choline. It requires either magnesium or manganese ions as cofactors. Phosphatidylethanolamine is also synthesized from phosphatidylserine at the mitochondrial inner membrane by phosphatidylserine decarboxylase. Phosphatidylserine, itself, is synthesized using a base-exchange reaction with phosphatidylcholine. This reaction is catalyzed by phosphatidylserine synthase which is located in the endoplasmic reticulum membrane.
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Creator: Carin Li Created On: August 10, 2018 at 20:54 Last Updated: August 10, 2018 at 20:54 |
PW083501View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/20:0)Bos taurus
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In the visualization, all enzymes that are dark green in colour are membrane-localized. The first pathway synthesizes phosphatidylethanolamine from ethanolamine via the Kennedy pathway. First, the cytosol-localized enzyme choline/ethanolamine kinase catalyzes the conversion of choline into phosphocholine. Second, choline-phosphate cytidylyltransferase, localized to the endoplasmic reticulum membrane, catalyzes the conversion of phosphocholine to CDP-choline. Last, choline/ethanolaminephosphotransferase catalyzes phosphatidylcholine biosynthesis from CDP-choline. It requires either magnesium or manganese ions as cofactors. Phosphatidylethanolamine is also synthesized from phosphatidylserine at the mitochondrial inner membrane by phosphatidylserine decarboxylase. Phosphatidylserine, itself, is synthesized using a base-exchange reaction with phosphatidylcholine. This reaction is catalyzed by phosphatidylserine synthase which is located in the endoplasmic reticulum membrane.
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Creator: Carin Li Created On: August 06, 2018 at 17:21 Last Updated: August 06, 2018 at 17:21 |
PW016229View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/20:0)Homo sapiens
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In Homo sapiens, there exist two phosphatidylethanolamine biosynthesis pathways. In the visualization, all enzymes that are dark green in colour are membrane-localized. The first pathway synthesizes phosphatidylethanolamine from ethanolamine via the Kennedy pathway. First, the cytosol-localized enzyme choline/ethanolamine kinase catalyzes the conversion of choline into phosphocholine. Second, choline-phosphate cytidylyltransferase, localized to the endoplasmic reticulum membrane, catalyzes the conversion of phosphocholine to CDP-choline. Last, choline/ethanolaminephosphotransferase catalyzes phosphatidylcholine biosynthesis from CDP-choline. It requires either magnesium or manganese ions as cofactors. Phosphatidylethanolamine is also synthesized from phosphatidylserine at the mitochondrial inner membrane by phosphatidylserine decarboxylase. Phosphatidylserine, itself, is synthesized using a base-exchange reaction with phosphatidylcholine. This reaction is catalyzed by phosphatidylserine synthase which is located in the endoplasmic reticulum membrane.
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Creator: Carin Li Created On: June 05, 2017 at 12:42 Last Updated: June 05, 2017 at 12:42 |
PW072548View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/20:0)Mus musculus
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In the visualization, all enzymes that are dark green in colour are membrane-localized. The first pathway synthesizes phosphatidylethanolamine from ethanolamine via the Kennedy pathway. First, the cytosol-localized enzyme choline/ethanolamine kinase catalyzes the conversion of choline into phosphocholine. Second, choline-phosphate cytidylyltransferase, localized to the endoplasmic reticulum membrane, catalyzes the conversion of phosphocholine to CDP-choline. Last, choline/ethanolaminephosphotransferase catalyzes phosphatidylcholine biosynthesis from CDP-choline. It requires either magnesium or manganese ions as cofactors. Phosphatidylethanolamine is also synthesized from phosphatidylserine at the mitochondrial inner membrane by phosphatidylserine decarboxylase. Phosphatidylserine, itself, is synthesized using a base-exchange reaction with phosphatidylcholine. This reaction is catalyzed by phosphatidylserine synthase which is located in the endoplasmic reticulum membrane.
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Creator: Carin Li Created On: August 02, 2018 at 11:11 Last Updated: August 02, 2018 at 11:11 |
PW016230View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/20:1(11Z))Homo sapiens
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In Homo sapiens, there exist two phosphatidylethanolamine biosynthesis pathways. In the visualization, all enzymes that are dark green in colour are membrane-localized. The first pathway synthesizes phosphatidylethanolamine from ethanolamine via the Kennedy pathway. First, the cytosol-localized enzyme choline/ethanolamine kinase catalyzes the conversion of choline into phosphocholine. Second, choline-phosphate cytidylyltransferase, localized to the endoplasmic reticulum membrane, catalyzes the conversion of phosphocholine to CDP-choline. Last, choline/ethanolaminephosphotransferase catalyzes phosphatidylcholine biosynthesis from CDP-choline. It requires either magnesium or manganese ions as cofactors. Phosphatidylethanolamine is also synthesized from phosphatidylserine at the mitochondrial inner membrane by phosphatidylserine decarboxylase. Phosphatidylserine, itself, is synthesized using a base-exchange reaction with phosphatidylcholine. This reaction is catalyzed by phosphatidylserine synthase which is located in the endoplasmic reticulum membrane.
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Creator: Carin Li Created On: June 05, 2017 at 12:43 Last Updated: June 05, 2017 at 12:43 |
PW072795View Pathway |
Phosphatidylethanolamine Biosynthesis PE(18:3(9Z,12Z,15Z)/20:1(11Z))Arabidopsis thaliana
Phosphatidylethanolamines (PE) are a class of phospholipids that incorporate a phosphoric acid headgroup into a diacylglycerol backbone. They are the second most abundant phospholipid in eukaryotic cell membranes, and contrary to phosphatidylcholine, it is concentrated with phosphatidylserine in the cell membrane's inner leaflet. In Arabidopsis thaliana, there exist two phosphatidylethanolamine biosynthesis pathways. The first pathway consists of mainly enzymes localized to either the cytosol or the cell membrane. Cell membrane-localized enzymes in this pathway are not drawn as such for clarity. Instead, they are indicated with a dark green colour and appear to be free floating in the cytosol. This first pathway begins with serine decarboxylase catalyzing the biosynthesis of ethanolamine from serine. It requires pyridoxal 5'-phosphate as a cofactor. Next, choline/ethanolamine kinase, localized to the cell membrane, catalyzes the conversion of ethanolamine to phosphoethanolamine. Then ethanolamine-phosphate cytidylyltransferase, localized to the mitochondria outer membrane, catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine. Last, choline/ethanolaminephosphotransferase, localized to the cell membrane, catalyzes phosphatidylethanolamine CDP-ethanolamine, respectively. The second pathway consists of mainly enzymes localized to the endoplasmic reticulum membrane (also depicted in dark green in the image. Beginning in the cytosol, glycerol-3-phosphate dehydrogenase [NAD(+)] catalyzes the interconversion of glycerone phosphate (from glycolysis) and glycerol 3-phosphate. After glycerol 3-phosphate enters the endoplasmic reticulum, glycerol-3-phosphate acyltransferase esterifies the acyl-group from acyl-CoA to the sn-1 position of glycerol-3-phosphate. Third, 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 catalyzes the conversion of lysophosphatidic acid (LPA or 1-acyl-sn-glycerol 3-phosphate) into phosphatidic acid (PA or 1,2-diacyl-sn-glycerol 3-phosphate) by incorporating an acyl moiety at the 2nd position. Fourth, phosphatidate cytidylyltransferase catalyzes the conversion of a 1,2-diacyl-sn-glycerol 3-phosphate into a CDP-diacylglycerol. It requires a magnesium ion as a cofactor. Fifth, CDP-diacylglycerol--serine O-phosphatidyltransferase catalyzes the synthesis of phosphatidylserine from L-serine and a CDP-diacylglycerol. Last, phosphatidylserine decarboxylase catalyzes the formation of phosphatidylethanolamine from phosphatidylserine. It requires pyruvate as a cofactor.
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Creator: Carin Li Created On: August 02, 2018 at 13:41 Last Updated: August 02, 2018 at 13:41 |