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Pathways

PathWhiz ID Pathway Meta Data

PW013307

Pw013307 View Pathway
metabolic

Mannose Metabolism

Arabidopsis thaliana
Mannose is a sugar monomer of the aldohexose series of carbohydrates and is a C-2 epimer of glucose. It is a key monosaccharide for protein and lipid glycosylation . The majority of mannose metabolism takes place in the cytosol. There are two routes to form mannose 6-phosphate. The first subpathway involves using beta-D-fructose 6-phosphate from glycolysis. The enzyme mannose-6-phosphate isomerase catalyzes the interconversion of beta-D-fructose 6-phosphate and D-mannose 6-phosphate. It requires a zinc ion as a cofactor. The second subpathway involves using the secreted enzyme, mannan endo-1,4-beta-mannosidase to catalyze the random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans to form D-mannose residues. These D-mannose residues are then imported into the cell cytoplasm via a sugar transport protein (a sugar/hydrogen symporter). Once inside the cell, hexokinase catalyzes the conversion of D-mannose into D-mannose 6-phosphate. Next, phosphomannomutase catalyzes the interconversion of D-mannose 6-phosphate and D-mannose 1-phosphate. However, D-mannose 1-phosphate can also be synthesized from ADP-mannose in the chloroplast via nudix hydrolase 14 and a magnesium or manganese ion cofactor. D-mannose 1-phosphate is then transported into the cytosol by a predicted D-mannose 1-phosphate transporter. Next, mannose-1-phosphate guanylyltransferase uses GTP to catalyze the conversion of D-mannose 1-phosphate into GDP-mannose. This is followed by GDP-mannose 4,6 dehydratase catalyzing the conversion of GDP-mannose into GDP-4-dehydro-6-deoxy-D-mannose. It requires NADP as a cofactor. Last, GDP-L-fucose synthase catalyzes the conversion of GDP-4-dehydro-6-deoxy-D-mannose into GDP-L-fucose.

PW002391

Pw002391 View Pathway
metabolic

Mannose Metabolism

Saccharomyces cerevisiae
Mannose is metabolized through the phosphorylation of mannose by a mannokinase resulting in a D-mannopyranose 6-phosphate. The latter compound is isomerized into a B-D-fructofuranose 6-phosphate which can either be incorporated into glycolysis or it can be further be metabolized into a mannose 1-phosphate through a phosphomannomutase. Mannose 1-phosphate then react with a gdp and a hydrogen ion to produce GDP-alpha-D-mannose

PW124309

Pw124309 View Pathway
metabolic

Mapa Intregado Metabolismo (CV)

Homo sapiens
Mapa metabólico intregado del Homo sapiens con rutas como el ciclo de Krebs, síntesis de ácido grasos, cadena transportadora de electrones, forsforilación oxidativa etc.

PW101953

Pw101953 View Pathway
metabolic

Mapa Metabolico

Homo sapiens

PW124285

Pw124285 View Pathway
metabolic

Mapa Metabolico Respiración Celular

Homo sapiens

PW126306

Pw126306 View Pathway
metabolic

Mapa metabólico

Homosapiens

PW126732

Pw126732 View Pathway
metabolic

Mapa metabólico 1647304077

Homosapiens

PW123976

Pw123976 View Pathway
signaling

MAPK

Homo sapiens
Mitogen-activated protein kinases (MAPKs) are serine/threonine kinases that mediate intracellular signaling associated with a variety of cellular activities including cell proliferation, differentiation, survival, death, and transformation [1, 2]. The three main members that integrate the MAPK family in mammalian cells are stress-activated protein kinase c-Jun NH2-terminal kinase (JNK), stress-activated protein kinase 2 (SAPK2, p38), and the extracellular signal-regulated protein kinases (ERK1/2, p44/p42). ERK has a threonine-glutamic acid-tyrosine (Thr-Glu-Tyr) motif [79, 80] that plays a central role in stimulation of cell proliferation [81, 82]. The biological consequences of phosphorylation of ERK substrates include increased proliferation, differentiation, survival [83], angiogenesis [84], motility [85], and invasiveness [86]. The ERK pathway is triggered mainly by mitogens and cytokines (Figure 1), acting through receptor tyrosine kinases, G-protein-coupled receptors, and nonnuclear activated steroid hormone receptors [4, 65]. Most of the signals activating the ERK pathway are initiated through receptor-mediated activation of Ras [4] by stimulating the exchange of GDP bound to Ras for GTP [91]. Then, Ras phosphorylates Raf-1. Then, a MAPK cascade is initiated in which Raf-1 sequentially phosphorylates MEK1/2 and ERK1/2. Later, ERK1/2 translocate to the nucleus in a process that culminates in modulation of gene transcription through the activation of several transcription factors such as Ets-1 [4], ATF-2, c-Fos, c-Myc, Elk-1 [92], or NF-κB [29] (Figure 1). At the same time, ERK1/2 can also phosphorylate cytoplasmic and nuclear kinases, such as MNK1, MNK2, MPKAP-2, RSK, or MSK1 [90]. TGF-β and EGF are growth factors that can induce tumor progression by means of the ERK pathway [93–96]. Several studies showed that these factors are overexpressed in prostate cancer in comparison with normal tissue [95–98]. In different tumor cells, expression of some EGF family members such as EGF or TGF-α is associated with poor patient prognosis or resistance to chemotherapeutics [94–99]. IGF-1 and EGF stimulate intracellular signaling pathways converging at the level of ERK2 [100], which is a key kinase mediator of growth-factor-induced mitogenesis in prostate cancer cells [101]. The two major substrates of the IGF-1 receptor, insulin receptor substrate-1 [102] and Shc, are known to contribute to IGF-1-induced activation of ERK [103]. The ERK signaling pathway plays a role in several steps of tumor development [14]. In fact, some components of the Raf-MEK-ERK pathway are activated in solid tumors (such as prostate or breast cancer) and hematological malignances [104–106]. In approximately 30% of human breast cancers, mutations are found in the ERK1/2 MAPK pathway [65]. ERK1/2 and downstream ERK1/2 targets are hyperphosphorylated in a large subset of mammary tumors [107]. Mutations of K-Ras appear frequently in many cancers including those of the lung and colon [108]. Mutations in the B-Raf gene are responsible for 66% of malignant melanomas [109]. Increased expressions of Raf pathway has been associated with advanced prostate cancer, hormonal independence, metastasis, and a poor prognosis [110]. Moreover, prostate cancer cell lines isolated from patients with advanced cancer (LNCaP, PC3, DU145) expressed low levels of active Raf kinase inhibitors [105]. TNF-α acts as an ERK activator in some cases related to inflammation and cell proliferation. In this way, Ricote et al. [11] showed that ERK phosphorylation was notably increased by TNF-α in a dose-dependent manner in LNCaP cells. In prostate cancer, presence of Raf-1 and MEK1 in conjunction with elevated ERK1 and ERK2, and their phosphorylated forms, suggests that stimulation of cell proliferation could be triggered by IL-6 via the ERK pathway [104]. In fact, IL-6 expression increased in prostate cancer in comparison with normal tissue [104, 111]. Moreover, LNCaP cells which produce IL-6 show increased proliferation, at least in part, due to ERK activation [112]. Recently, a phase I clinical trial has revealed the ability of an anti-IL-6 antibody (siltuximab) to inhibit ERK1/2 phosphorylation in prostate tumors [113].

PW124190

Pw124190 View Pathway
signaling

MAPK 1601653029

Homo sapiens

PW127226

Pw127226 View Pathway
disease

Maple Syrup Urine Disease

Homo sapiens
Maple syrup urine disease, also called BCKD deficiency, is a rare inborn error of metabolism (IEM) and autosomal recessive disorder caused by a defective BCKDHA, BKCDHB or DBT gene. These genes code for a protein which is vital in the breakdown of amino acids, specifically the amino acids leucine, isoleucine and valine. This disorder is characterized by a large accumulation of these amino acids in the body. Symptoms of the disorder include a distinct maple syrup smell of the urine, vomiting, lethargy, abnormal movements and delayed development. Treatment includes long-term dietary management which aims to restrict the consumption of branched-chain amino acids. It is estimated that maple syrup urine disorder affects 1 in 185,000 infants globally. This number increases significantly when looking specifically at Old World Order Mennonites, where the prevalence is 1 in 380 infants.