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Pathways

PathWhiz ID Pathway Meta Data

PW002511

Pw002511 View Pathway
metabolic

Riboneogenesis

Saccharomyces cerevisiae
The riboneogenesis pathway is in charge of converting 3 carbon units into ribose. This pathway involves the conversion of fructose 6 phosphate which can be derived from the gluconeogenesis pathway. Fructose 6 phosphate reacts with a glyceraldehyde 3 phosphate through a transketolase resulting in the release of erythrose 4 phosphate and xylulose 5 phosphate. Erythrose 4 phosphate reacts with a dihydroxyacetone phosphate resulting in a release of sedoheptulose 1,7-biphosphate. Sedoheptulose 1,7-biphosphate is transformed by SHB17 resulting in the release of sedoheptulose 7 phosphate and a phosphate. Sedoheptulose 7 phosphate reacts with a glyceraldehyde 3 phosphate through a transketolase resulting in the release of xylulose 5 phosphate and ribose 5 phosphate. Ribose 5 phosphate can react with reversibly through a ribose 5 phosphate ketol-isomerase resulting in the release of ribulose 5 phosphate. Xylulose 5 phosphate can react reversibly through a ribulose 5 phosphate 3-epimerase resulting in the release of ribulose 5 phosphate.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: miguel ramirez

Created On: March 30, 2016 at 11:57

Last Updated: March 30, 2016 at 11:57

PW340081

Pw340081 View Pathway
metabolic

Ribose Degradation

Bacteroides intestinalis
Escherichia coli can utilize the monosaccharide D-ribose as the sole source of carbon and energy for the cell. A high-affinity ABC transport system transports D-ribose into the cell as unphosphorylated beta-D-ribopyranose. Ribose pyranase converts between the furanose and pyranose forms of beta-D-ribose. D-ribofuranose converts between the alpha and beta anomers quickly and spontaneously. Ribokinase converts D-ribose to the pentose phosphate pathway intermediate, D-ribose 5-phosphate, which can enter the central metabolism pathways to meet the cells needs.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: Julia Wakoli

Created On: October 30, 2024 at 11:31

Last Updated: October 30, 2024 at 11:31

PW339837

Pw339837 View Pathway
metabolic

Ribose Degradation

Bacteroides xylanisolvens XB1A
Escherichia coli can utilize the monosaccharide D-ribose as the sole source of carbon and energy for the cell. A high-affinity ABC transport system transports D-ribose into the cell as unphosphorylated beta-D-ribopyranose. Ribose pyranase converts between the furanose and pyranose forms of beta-D-ribose. D-ribofuranose converts between the alpha and beta anomers quickly and spontaneously. Ribokinase converts D-ribose to the pentose phosphate pathway intermediate, D-ribose 5-phosphate, which can enter the central metabolism pathways to meet the cells needs.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: Julia Wakoli

Created On: October 30, 2024 at 10:23

Last Updated: October 30, 2024 at 10:23

PW339952

Pw339952 View Pathway
metabolic

Ribose Degradation

Parabacteroides goldsteinii dnLKV18
Escherichia coli can utilize the monosaccharide D-ribose as the sole source of carbon and energy for the cell. A high-affinity ABC transport system transports D-ribose into the cell as unphosphorylated beta-D-ribopyranose. Ribose pyranase converts between the furanose and pyranose forms of beta-D-ribose. D-ribofuranose converts between the alpha and beta anomers quickly and spontaneously. Ribokinase converts D-ribose to the pentose phosphate pathway intermediate, D-ribose 5-phosphate, which can enter the central metabolism pathways to meet the cells needs.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: Julia Wakoli

Created On: October 30, 2024 at 10:56

Last Updated: October 30, 2024 at 10:56

PW358584

Pw358584 View Pathway
metabolic

Ribose Degradation

Escherichia coli HS
Escherichia coli can utilize the monosaccharide D-ribose as the sole source of carbon and energy for the cell. A high-affinity ABC transport system transports D-ribose into the cell as unphosphorylated beta-D-ribopyranose. Ribose pyranase converts between the furanose and pyranose forms of beta-D-ribose. D-ribofuranose converts between the alpha and beta anomers quickly and spontaneously. Ribokinase converts D-ribose to the pentose phosphate pathway intermediate, D-ribose 5-phosphate, which can enter the central metabolism pathways to meet the cells needs.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: Julia Wakoli

Created On: November 13, 2024 at 16:06

Last Updated: November 13, 2024 at 16:06

PW358591

Pw358591 View Pathway
metabolic

Ribose Degradation

Escherichia coli IAI1
Escherichia coli can utilize the monosaccharide D-ribose as the sole source of carbon and energy for the cell. A high-affinity ABC transport system transports D-ribose into the cell as unphosphorylated beta-D-ribopyranose. Ribose pyranase converts between the furanose and pyranose forms of beta-D-ribose. D-ribofuranose converts between the alpha and beta anomers quickly and spontaneously. Ribokinase converts D-ribose to the pentose phosphate pathway intermediate, D-ribose 5-phosphate, which can enter the central metabolism pathways to meet the cells needs.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: Julia Wakoli

Created On: November 13, 2024 at 16:09

Last Updated: November 13, 2024 at 16:09

PW340536

Pw340536 View Pathway
metabolic

Ribose Degradation

Bacteroides finegoldii DSM 17565
Escherichia coli can utilize the monosaccharide D-ribose as the sole source of carbon and energy for the cell. A high-affinity ABC transport system transports D-ribose into the cell as unphosphorylated beta-D-ribopyranose. Ribose pyranase converts between the furanose and pyranose forms of beta-D-ribose. D-ribofuranose converts between the alpha and beta anomers quickly and spontaneously. Ribokinase converts D-ribose to the pentose phosphate pathway intermediate, D-ribose 5-phosphate, which can enter the central metabolism pathways to meet the cells needs.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: Julia Wakoli

Created On: October 30, 2024 at 16:41

Last Updated: October 30, 2024 at 16:41

PW340524

Pw340524 View Pathway
metabolic

Ribose Degradation

Bacteroides cellulosilyticus DSM 14838
Escherichia coli can utilize the monosaccharide D-ribose as the sole source of carbon and energy for the cell. A high-affinity ABC transport system transports D-ribose into the cell as unphosphorylated beta-D-ribopyranose. Ribose pyranase converts between the furanose and pyranose forms of beta-D-ribose. D-ribofuranose converts between the alpha and beta anomers quickly and spontaneously. Ribokinase converts D-ribose to the pentose phosphate pathway intermediate, D-ribose 5-phosphate, which can enter the central metabolism pathways to meet the cells needs.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: Julia Wakoli

Created On: October 30, 2024 at 16:31

Last Updated: October 30, 2024 at 16:31

PW340567

Pw340567 View Pathway
metabolic

Ribose Degradation

Bacteroides xylanisolvens SD CC 1b
Escherichia coli can utilize the monosaccharide D-ribose as the sole source of carbon and energy for the cell. A high-affinity ABC transport system transports D-ribose into the cell as unphosphorylated beta-D-ribopyranose. Ribose pyranase converts between the furanose and pyranose forms of beta-D-ribose. D-ribofuranose converts between the alpha and beta anomers quickly and spontaneously. Ribokinase converts D-ribose to the pentose phosphate pathway intermediate, D-ribose 5-phosphate, which can enter the central metabolism pathways to meet the cells needs.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: Julia Wakoli

Created On: October 30, 2024 at 17:04

Last Updated: October 30, 2024 at 17:04

PW340682

Pw340682 View Pathway
metabolic

Ribose Degradation

Prevotella pallens ATCC 700821
Escherichia coli can utilize the monosaccharide D-ribose as the sole source of carbon and energy for the cell. A high-affinity ABC transport system transports D-ribose into the cell as unphosphorylated beta-D-ribopyranose. Ribose pyranase converts between the furanose and pyranose forms of beta-D-ribose. D-ribofuranose converts between the alpha and beta anomers quickly and spontaneously. Ribokinase converts D-ribose to the pentose phosphate pathway intermediate, D-ribose 5-phosphate, which can enter the central metabolism pathways to meet the cells needs.
BioPAX SVG SBGN SBML PWML All files (.zip)

Creator: Julia Wakoli

Created On: October 30, 2024 at 18:25

Last Updated: October 30, 2024 at 18:25