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Pathway Legend

Compounds
Amp Adp Atp Adenosine Phosphates Ammonia Ammonia
Calcium Calcium Carbon dioxide Carbon Dioxide
Chlorine Chlorine Coa Coenzyme A
Cofactor Cofactor Default Small Molecule Compound
Drug small Drug Compound Fad Fadh2 Flavin Adenine Dinucleotides
Gdp Gtp Guanosine Phosphates Hco3 Bicarbonate
Hydrogen Hydrogen Magnesium Magnesium
Nad Nadh Nadp Nadph Nicotinamide Adenine Dinucleotides Nitric oxide Nitric Oxide
Oxygen Oxygen Peroxide Hydrogen Peroxide
Phosphate Phosphate Pyrophosphate Pyrophosphate
Potassium Potassium Q Qh2 Quinones
Sodium Sodium Water Water
Simple Simplified Small Molecule Representation
ProteinComplexes
Monomer1 Monomer2 Monomer3 Monomer4 Enzyme Monomers
Dimer Enzyme Dimer Trimer Enzyme Trimer
Tetramer Enzyme Tetramer Hexamer Enzyme Hexamer
Octamer Enzyme Octamer Multimer Enzyme Multimer
Drug monomer ProteinComplex Drug Monomer Receptor ProteinComplex
Monomer Transport Monomer Dimer Transport Dimer
Tetramer Transport Tetramer Simple uniprot Simple gene name Simplified Protein Representations
Nucleic Acids
Default Generic Nucleic Acid Trna tRNA
Gene1 Gene2 Gene3 Gene4 Gene5 Gene6 Gene7 Genes Simple Simplified Nucleic Acid Representation
Collections
Default Compound Collection Nucleic acid Nucleic Acid Collection
Protein Protein Collection Receptor Receptor Collection
Simple Simplified Element Collection Representation
Cell Components
Cell Cell Er Endoplasmic Reticulum
Golgi Golgi Apparatus Lysosome Lysosome
Melanosome Melanosome Mitochondria Mitochondria
Nucleus Nucleus Peroxisome Peroxisome
Rer Rough Endoplasmic Reticulum Ser Smooth Endoplasmic Reticulum
Ribosome Ribosome Chloroplast Chloroplast
Vacuole Vacuole
Er membrane Endoplasmic Reticulum Membrane Golgi membrane Golgi Apparatus Membrane
Lysosome membrane Lysosome Membrane Mitochondria membrane Mitochondria Membrane
Nucleus membrane Nucleus Membrane Peroxisome membrane Peroxisome Membrane
Chloroplast membrane Chloroplast Membrane Vacuole membrane Vacuole Membrane
Plasma membrane Plasma Membrane Melanosome membrane Melanosome Membrane
Simple Simplified Membrane Representation
Organs
Blood vessel Blood Vessel Bone Bone
Brain Brain Ear Ear
Eye Eye Female genitalia Female Genitalia
Gallbladder Gall Bladder Gastrointestinal Gastrointestinal Tract
Hair Hair Heart Heart
Intestinal epithelial cell Intestinal epithelial cell zoomed 1 Intestinal epithelial cell zoomed 2 Intestinal Epithelial Cells
Kidney Kidney Liver Liver
Lung Lung Male genitalia Male Genitalia
Mammary gland Mammary Gland Muscle Muscle
Nephron Nephron Neuron Neuron
Pancreas Pancreas Platelet Platelet
Skin Skin Stomach Stomach
Other Molecules
Chylomicron Chylomicron Dna replication DNA Replication
Hepatitisbvirus Hepatitis B Virus Infection Infection
Intestinal microflora Intestinal Microflora Nucleotide excision repair Nucleotide Excision Repair
Toxic Toxic Transcription Transcription
Translation Translation Viral transcription Viral Transcription
Edges
Activation Activation Catalysis Catalysis
Covalent bond Covalent Bond Inhibition Inhibition
Transport Transport Line Generic Line
Super arrow Pathway Join Simple Simple dashed Simplified Edge Representations
General Visualization
Default Label Knockout Knock Out
Accumulation Accumulation Dissipation Dissipation
Simple Simplified Sub-Pathway Representation Default Sub-Pathway
Er zoom Endoplasmic Reticulum Zoom Box Golgi zoom Golgi Apparatus Zoom Box
Lysosome zoom Lysosome Zoom Box Mitochondria zoom Mitochondria Zoom Box
Nucleus zoom Nucleus Zoom Box Peroxisome zoom Peroxisome Zoom Box
Chloroplast zoom Chloroplast Zoom Box Vacuole zoom Vacuole Zoom Box
Zoom Generic Zoom Box