Quantitative metabolomics services for biomarker discovery and validation.
Specializing in ready to use metabolomics kits.
Your source for quantitative metabolomics technologies and bioinformatics.
You are using an unsupported browser. Please upgrade your browser to a newer version to get the best experience on Small Molecule Pathway Database.
Loading Pathway...
HMDB03125 HMDB 7722-84-1 CAS D-amino-acid oxidase CL:0000000 CELL TYPE ONTOLOGY 937 ChemSpider C00792 KEGG Compound HMDB06875 HMDB 1.0 CHEBI:16134 ChEBI Peroxisome C6H14N4O2 D-Arginine 174.11168 64224 ChemSpider HYDROGEN-PEROXIDE BioCyc SMILES O C5H9NO3 5-Amino-2-oxopentanoic acid 131.05824 SMILES OO H3N Ammonia 17.026548 57-13-6 CAS 388519 ChemSpider 71070 PubChem-compound 1.0 HMDB04225 HMDB HMDB03416 HMDB 1.0 P14920 UniProt 64236 ChemSpider HMDB03374 HMDB 389057 ChemSpider Oxygen 763 ChemSpider C5H7NO2 1-Pyrroline-2-carboxylic acid 113.047676 CH4N2O Urea 60.032364 SMP00036 SMPDB CPD-824 BioCyc Cell 1.0 784 PubChem-compound 7732-18-5 CAS 1143 ChemSpider C03564 KEGG Compound CHEBI:16199 ChEBI CHEBI:36761 ChEBI 952 ChemSpider SMILES N[C@H](CCCNC(N)=N)C(O)=O O2 Oxygen 31.98983 SMILES NCCCC(=O)C(O)=O 440046 PubChem-compound D-amino-acid oxidase D-Ornithine SubPathwayOutput AMMONIA BioCyc SMILES N UREA BioCyc SubPathwayInteraction68 SubPathwayReaction SubPathway68Reaction CHEBI:15816 ChEBI 1.0 5-AMINO-2-OXOPENTANOATE BioCyc 1.4.3.3 false 1.4.3.3 D-Ornithine + Oxygen + Water → 5-Amino-2-oxopentanoic acid + Ammonia + Hydrogen peroxide LEFT_TO_RIGHT C5H12N2O2 D-Ornithine 132.08987 CHEBI:16240 ChEBI 7782-44-7 CAS CHEBI:58489 ChEBI SMILES [O-]C(=O)C1=[NH+]CCC1 542 ChemSpider SMILES NC(N)=O GO:0005777 GENE ONTOLOGY 71082 PubChem-compound 9606 TAXONOMY C00515 KEGG Compound CPD-217 BioCyc 962 PubChem-compound ReactionCatalysis232 ACTIVATION ReactionCatalysis233 ACTIVATION Water 348-66-3 CAS 2.0 CPD-6641 BioCyc HMDB00051 HMDB DELTA1-PYRROLINE_2-CARBOXYLATE BioCyc CHEBI:16176 ChEBI HMDB00294 HMDB 217 ChemSpider 1.0 1176 PubChem-compound HMDB02111 HMDB Ammonia 2139-03-9 CAS SMILES O=O HMDB06272 HMDB PW000019 PathWhiz BiologicalState5 D-amino-acid oxidase CHEBI:49268 ChEBI D-Arginine SubPathwayOutput C6H11N3O3 2-Oxoarginine 173.08005 2-Oxoarginine CHEBI:15377 ChEBI C00007 KEGG Compound CHEBI:15379 ChEBI Reaction724 true 5-Amino-2-oxopentanoic acid + Urea ↔ 2-Oxoarginine + Water REVERSIBLE Reaction725 true 5-Amino-2-oxopentanoic acid ↔ 1-Pyrroline-2-carboxylic acid + Water REVERSIBLE 1.4.3.3 false 1.4.3.3 D-Arginine + Oxygen + Water → 2-Oxoarginine + Ammonia + Hydrogen peroxide LEFT_TO_RIGHT 558 PubChem-compound C00001 KEGG Compound CPD-220 BioCyc Intestinal Microflora SubPathway SMILES NCCC[C@@H](N)C(O)=O C00086 KEGG Compound 1-Pyrroline-2-carboxylic acid Urea 7664-41-7 CAS 5-Amino-2-oxopentanoic acid Hydrogen peroxide 157-06-2 CAS 1.0 1.0 222 PubChem-compound C00014 KEGG Compound 1.0 H2O Water 18.010565 H2O2 Hydrogen peroxide 34.005478 SMILES NC(N)=NCCCC(=O)C(O)=O 3715-10-4 CAS HMDB01377 HMDB 977 PubChem-compound C01110 KEGG Compound C00027 KEGG Compound C03771 KEGG Compound 439402 PubChem-compound 1.0 D-Arginine and D-Ornithine Metabolism D-amino-acid oxidase D-amino-acid oxidase D-Arginine D-Ornithine H 2 O O 2 5-Amino-2-oxopentanoic acid NH 3 H 2 O 2 2-Oxoarginine Urea H 2 O 1-Pyrroline- 2-carboxylic acid H 2 O FAD FAD Extracellular Space Intracellular Space Peroxisome Peroxisome
HMDB03125 HMDB 7722-84-1 CAS D-amino-acid oxidase CL:0000000 CELL TYPE ONTOLOGY 937 ChemSpider C00792 KEGG Compound HMDB06875 HMDB 1.0 CHEBI:16134 ChEBI Peroxisome C6H14N4O2 D-Arginine 174.11168 64224 ChemSpider HYDROGEN-PEROXIDE BioCyc SMILES O C5H9NO3 5-Amino-2-oxopentanoic acid 131.05824 SMILES OO H3N Ammonia 17.026548 57-13-6 CAS 388519 ChemSpider 71070 PubChem-compound 1.0 HMDB04225 HMDB HMDB03416 HMDB 1.0 P14920 UniProt 64236 ChemSpider HMDB03374 HMDB 389057 ChemSpider Oxygen 763 ChemSpider C5H7NO2 1-Pyrroline-2-carboxylic acid 113.047676 CH4N2O Urea 60.032364 http://identifiers.org/smpdb/SMP00036 SMPDB CPD-824 BioCyc Cell 1.0 784 PubChem-compound 7732-18-5 CAS 1143 ChemSpider C03564 KEGG Compound CHEBI:16199 ChEBI CHEBI:36761 ChEBI 952 ChemSpider SMILES N[C@H](CCCNC(N)=N)C(O)=O O2 Oxygen 31.98983 SMILES NCCCC(=O)C(O)=O 440046 PubChem-compound D-amino-acid oxidase D-Ornithine SubPathwayOutput AMMONIA BioCyc SMILES N UREA BioCyc SubPathwayInteraction68 SubPathwayReaction SubPathway68Reaction CHEBI:15816 ChEBI 1.0 5-AMINO-2-OXOPENTANOATE BioCyc 1.4.3.3 false 1.4.3.3 D-Ornithine + Oxygen + Water → 5-Amino-2-oxopentanoic acid + Ammonia + Hydrogen peroxide LEFT_TO_RIGHT C5H12N2O2 D-Ornithine 132.08987 CHEBI:16240 ChEBI 7782-44-7 CAS CHEBI:58489 ChEBI SMILES [O-]C(=O)C1=[NH+]CCC1 542 ChemSpider SMILES NC(N)=O GO:0005777 GENE ONTOLOGY 71082 PubChem-compound 9606 TAXONOMY C00515 KEGG Compound CPD-217 BioCyc 962 PubChem-compound ReactionCatalysis232 ACTIVATION ReactionCatalysis233 ACTIVATION Water 348-66-3 CAS 2.0 CPD-6641 BioCyc HMDB00051 HMDB DELTA1-PYRROLINE_2-CARBOXYLATE BioCyc CHEBI:16176 ChEBI HMDB00294 HMDB 217 ChemSpider 1.0 1176 PubChem-compound HMDB02111 HMDB Ammonia 2139-03-9 CAS SMILES O=O HMDB06272 HMDB PW000019 PathWhiz BiologicalState5 Homo sapiens, Cell, Peroxisome D-amino-acid oxidase CHEBI:49268 ChEBI D-Arginine SubPathwayOutput C6H11N3O3 2-Oxoarginine 173.08005 2-Oxoarginine CHEBI:15377 ChEBI C00007 KEGG Compound CHEBI:15379 ChEBI Reaction724 true 5-Amino-2-oxopentanoic acid + Urea ↔ 2-Oxoarginine + Water REVERSIBLE Reaction725 true 5-Amino-2-oxopentanoic acid ↔ 1-Pyrroline-2-carboxylic acid + Water REVERSIBLE 1.4.3.3 false 1.4.3.3 D-Arginine + Oxygen + Water → 2-Oxoarginine + Ammonia + Hydrogen peroxide LEFT_TO_RIGHT 558 PubChem-compound C00001 KEGG Compound CPD-220 BioCyc Intestinal Microflora SubPathway SMILES NCCC[C@@H](N)C(O)=O C00086 KEGG Compound 1-Pyrroline-2-carboxylic acid Urea 7664-41-7 CAS 5-Amino-2-oxopentanoic acid Hydrogen peroxide 157-06-2 CAS 1.0 1.0 222 PubChem-compound C00014 KEGG Compound 1.0 H2O Water 18.010565 H2O2 Hydrogen peroxide 34.005478 SMILES NC(N)=NCCCC(=O)C(O)=O 3715-10-4 CAS HMDB01377 HMDB 977 PubChem-compound C01110 KEGG Compound C00027 KEGG Compound C03771 KEGG Compound 439402 PubChem-compound 1.0 D-Arginine and D-Ornithine Metabolism Peroxisome DAO DAO D-Arginine D-Ornithine Water Oxygen 5-Amino-2- oxopentanoic acid Ammonia Hydrogen peroxide 2-Oxoarginine Urea Water 1-Pyrroline- 2-carboxylic acid Water Intestinal Microflora