Browsing Pathways
Showing 171 -
180 of 605359 pathways
SMPDB ID | Pathway Name and Description | Pathway Class | Chemical Compounds | Proteins |
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SMP0123147View Pathway |
RAGE and TLR4 signalling |
Signaling
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SMP0123269View Pathway |
EGFR |
Signaling
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SMP0121021View Pathway |
Dopamine Signaling PathwayThe receptor is a transmembrane G Protein-Coupled Receptor, specifically a D1 dopamine receptor. These receptors are present in the central nervous system. The transmembrane G Protein-Coupled Receptor works by sensing dopamine outside the cell that triggers the transduction pathways. To activate the receptor, dopamine must bind to it. After the dopamine binds to the receptor, it changes shape and an inactive G protein binds to it, causing a GTP to displace a GDP on the protein. The protein then dissociates from the receptor and binds to the adenylyl cyclase, which then becomes activated. A cAMP pathway and a phosphorylation cascade then occurs.The transduction pathway is G protein reception in the D1 dopamine receptors. During this process in a normal cell without Parkinson’s, a series of proteins are phosphorylized. These proteins are protein kinases. But before this occurs, the G Protein activates adenylyl cyclase, which converts ATP to cAMP (cyclic AMP, the second messenger). The cAMP then activates protein kinase A. A phosphorylation cascade then occurs, resulting in a series of inactive protein kinases becoming activated by ATP. Protein phosphates then catalyze the removal of phosphate groups from the proteins, causing the proteins to return to an inactive state. The phosphate group is then transferred to the next protein kinase in the chain and this continues until finally the transcription factor is phosphorylated. The transcription factor being activated causes transcription to occur in the neuron of the striatum. In neurons with Parkinson’s disease, this pathway never occurs because the dopamine never reaches the receptors.The effector protein is a transcription factor that causes transcription to occur in striatal cells. Whatever the cause of the Parkinson’s disease in the individual, the result is the neurons of the substantia nigra carry out apoptosis. This causes dopamine to not be released during synaptic transmission. Therefore no dopamine reaches the striatum and fine motor functions are unable to be controlled normally in the individual. Over time this lack of control intensifies and affects many aspects of life including muscle control, walking, balance, and speech.
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Signaling
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SMP0174258View Pathway |
Receptor Ligand Pathway |
Signaling
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SMP0125975View Pathway |
JAK/STAT Anti-viral PathwayThe Janus kinase-signal transducer and activator of transcription (JAK-STAT) signalling pathway is a pathway with many functions, one of which is an anti-viral response. IFN-γ activates interferon gamma receptors 1 and 2 (INFGR1 and INFGR2), which are associated with Janus kinase 1 (JAK1) and Janus kinase 2 (JAK2) which leads to the phosphorylation of signal transducer and activator of transcription 1 (STAT1) homodimers. Phosphorylated STAT1 homodimers are translocated to the nucleus where it activates the transcription of gamma activated sequence (GAS) elements, which activates an inflammatory response and immunoregulation. INFGR1 and INFGR2 also phosphoylate STAT3 homodimers which are subsequently translocated to the nucleus where they also activate GAS elements.
Type 1 interferons (IFNs) activate interferon alpha receptors 1 and 2 (IFNAR1 and IFNAR2) which are associated with tyrosine kinase 2 (TYK2) and JAK1 respectively. This receptor complex also phosphorylates STAT3 homodimers. The IFNAR complex phorphoylates STAT5 which binds with Crk-like protein (CRKL). This complex also activates the GAS elements in the nucleus. The main pathway of IFNAR1 and IFNAR2 is through the phosphorylation of STAT1 and STAT2. Together with interferon regulatory factor (IRF9) they form the interferon-stimulated gene factor 3 (ISGF3). The ISGF3 translocates to the nucleus and initiates the trascription of Interferon-sensitive response element (ISRE). This leads to an antiviral response, immunoregulation, antigen presentation, and checkpoint proteins. THE ISRE genes also activate IFN regulated genes. These along with lipopolysaccharides or foreign pathogens activates interferon Regulatory Factor 7 (IRF7). IRF7 is phosphorylated and bound with nuclear factor kappa B (NFKB). This causes the induction of type 1 INFs, which further activates the pathway.
IFNAR1 and IFNAR2, activated by type 1 IFNs, signal through TYK2 and JAK1 to also trigger the activation of the NFKB pathway through phosphorylated STAT3, phosphoinositide 3-kinase (PI3K), protein kinase B (AKT), and TNF receptor-associated factors (TRAFs). They act through IKKa and IKKb to drive NFKB induction of genes associated with survival signals, antigen processing and presentation, and proliferation.
Cytokines, like the various interleukins, activate their corresponding cytokine receptors/JAK complexes. This results in the phosphorylation of STATs, such as STAT3 and STAT5 or a STAT3 homodimer. These phosphorylated STATs are translocated to the nucleus where they transcribe genes involved in inflammation, angiogenesis, proliferation, and survival.
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Signaling
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SMP0226951View Pathway |
hedgehog |
Signaling
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SMP0122286View Pathway |
A20 mechanism pathway 1560515737 1568969187 |
Signaling
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SMP0122301View Pathway |
VEGFR |
Signaling
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SMP0122370View Pathway |
DGKa |
Signaling
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SMP0122344View Pathway |
p53 mediated apoptotic pathway |
Signaling
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Showing 171 -
180 of 351 pathways